Integrated Pathology Core
About us
The Integrated Pathology Core (IPC) provides investigators with state-of-the-art histology and advanced optical light microscopy imaging and analysis through extensive expertise, services, data analysis, and access to advanced equipment. Services provided include routine histology, cryosectioning, immunohistochemistry, next-generation RNAScope/DNAScope in situ hybridization, advanced optical light (bright field and multi-spectral confocal) microscopy, digital whole-slide imaging, and quantitative image analysis. Core personnel are available at every stage of histology and microscopy-based experiments, from planning to training, troubleshooting, and quality control.
The Core has an extensive resource of tissue-based analyses and techniques including multiplexed immunohistochemical and immunofluorescence staining and RNA/DNAScope in situ hybridization. In addition to routine and automated histology equipment, advanced histology techniques are supported by a Biocare IntelliPATH automated stainer for immunohistochemistry. Imaging and microscopy capabilities include a Leica Stellaris 8 confocal, Leica Aperiao AT2 bright field slide scanner, Olympus VS120 fluorescence (up to 5 channels) and Bright field slide scanner with multiple slide inserts, and a Keyence BZ-X810 Fluorescence Microscope. Image analysis is supported by multiple platforms including the HALO Image Analysis suite (Indica Lab, Corrales, NM), an advanced quantitative image analysis package that supports unique tissue-specific and disease-specific applications.
Contact us
Director, Integrated Pathology Core
Oleg Varlamov, MD, PhD
varlamov@ohsu.edu
503-346-5377
Histology services
Rachel Dannay
dannay@ohsu.edu
503-346-5077
Advanced Microscopy services
Sathya Srinivansan, PhD
srinivsa@ohsu.edu
503-346-5072
Shipping address
Integrated Pathology Core
Oregon National Primate Research Center
Campus Mail Code L-584
505 NW 185th Avenue
Beaverton, OR 97006
Integrated Pathology Core Services
- Pre-project planning
- Expert consultation
- Method documentation
- Publication preparation
- Routine and customized tissue processing
- Embedding, sectioning (including large format blocks)
- Routine hematoxylin and eosin staining
- Frozen sectioning
- Custom sectioning: serial, step, large format
- Special histochemical stains
- Cassette and slide printing
- Bench top and automated immunohistochemistry
- Antibody optimization
- Multiplex immunohistochemistry
- RNAscope and DNAscope In Situ Hybridization
- Extensive portfolio of antibodies and In situ Hybridization probes validated for use in macaques
- Tissue processors
- Leica cassette labeler
- Leica slide printer, automated cover-slipper, ans auto-stainer
- Semi-automated and manual rotary microtomes
- Biocare IntelliPATH automated immunohistochemistry platform
- Fluorescence imaging: confocal, wide-field, and deconvolution microscopy
- Special fluorescence techniques: FURA-2, FRET, FRAP, and live-cell time-lapse imaging
- Large-area image montages: color bright field or fluorescence, including 3D confocal
- Stereology image analysis
- Image processing, 3D rendering, movies
- Quantitative image analysis and stereology
- Leica Aperio AT2 400 slide scanner (bright field)
- Olympus VS120 bright field and fluorescent (up to 5 channels) slide scanner
- Leica Stellaris 8 confocal microscope
- MBF Bioscience Stereology System (offline analysis)
- HALO Image Analysis: HALO, HALOLink
- MBF Bioscience Stereology System with StereoInvestigators and NeuroLucida
- Olympus CellSens
- QuPath
- FIJI/ ImageJ