John V. Brigande, Ph.D.

  • Professor of Otolaryngology - Head and Neck Surgery, School of Medicine
  • Professor of Cell, Developmental and Cancer Biology, School of Medicine
  • Cell and Developmental Biology Graduate Program, School of Medicine
  • Neuroscience Graduate Program, School of Medicine
  • Program in Molecular and Cellular Biosciences, School of Medicine

Biography

Background

John V. Brigande's introduction to neuroscience formally began in Thomas N. Seyfried's lab at Boston College where his Master's work focused on reactive astrocytosis in a mouse model of human temporal lobe epilepsy. Brigande then transitioned to developmental neurobiology for his doctoral work again with Dr. Seyfried studying glycosphinogolipid biosynthesis in the organogenesis-stage mouse embryo. His doctoral studies ignited a passion for mammalian development that was fostered by postdoctoral training in developmental genetics with Karen Artzt at the University of Texas at Austin and in auditory development with Donna M. Fekete at Purdue University. Brigande began his assistant professorship in the Oregon Hearing Research Center in July 2003 and was promoted to associate professor in 2009. Brigande joined the Hearing Health Foundation's Hearing Restoration Project in 2011 and works on the definition of mouse model systems to test candidate genes for hair cell regeneration

Summary of current research

We study the development of the mammalian inner ear using mouse as a model system. Our approach involves experimental embryology, a palette of surgical, micromanipulation, and gene transfer techniques that enables interrogation of developmental processes in vivo. Our long term goal is to apply what we learn about the genetic mechanisms governing inner ear sensory organ development to define and validate efficacious gene and cell therapies to treat hearing loss and balance disorders.

Retroviral lineage analysis enables us to understand the types of cell fate choices an otic progenitor makes and the timing of those choices during sensory organ formation. We have shown by transuterine microinjection of lineage virus at embryonic day 11.5 (E11.5) that both auditory and vestibular hair cells are lineally related to their supporting cells and that spiral ganglion neurons, interdental cells, and Claudius’ cells are lineally related to cells of the same type. We have also identified clonal relationships between organ of Corti cell types that reside on opposite sides of the tunnel of Corti. The extensive clonal dispersion detected and the observation of clonally related cells that span the tunnel suggest that progenitors integrating lineage label at ~E12 do not respect anatomical boundaries during convergent extension of the nascent cochlea. Correlating these observations with single cell transcriptomics of inner ear sensory cells may give us insight into the gene expression profiles required to specify individual sensory lineages and perhaps serve as the basis for new strategies to regenerate the sensory patch for therapeutic benefit.

Fetal pharmacotherapy for congenital deafness involves the use of gene replacement or drug strategies to restore wild type gene function during formation of the inner ear in utero. Our proof of concept for gene replacement focuses on the vesicular glutamate transporter 3 (VGLUT3) knockout mouse which is deaf at birth. Remarkably, adeno-associated virus (AAV)-mediated gene transfer of VGLUT3 into the E12.5 otocyst can restore auditory brainstem response thresholds (ABR) to near wild type levels. Our proof of concept for drug therapy focuses on the Usher 1c knockout mouse which is also deaf at birth. Transuterine microinjection of antisense oligonucleotide designed to correct mRNA slicing of harmonin incompletely but significantly restores ABR thresholds after a single dose to the E12.5 otocyst. These studies represent an exciting new experimental path for our lab that is refreshingly translational in perspective. 

Our lab is a member of the Hearing Health Foundation’s Hearing Restoration Project (HRP). The organizing principle of the HRP is that strategic collaborations among participating labs will more efficiently advance the science needed to define efficacious therapies for treating hearing loss and tinnitus. Our specific role is to devise mouse model systems required to test candidate hair cell regeneration genes in the postnatal, deafened mouse inner ear. Our HRP affiliation has led to intellectually engaging and productive ongoing collaborations that leave us excited about future prospects for treating inner ear disease.

Major Milestones and Significant Discoveries

Misexpression of the transcription factor atonal homolog 1 in the developing mouse inner ear generates functional auditory hair cells The in utero gene transfer technique premits gain and loss-of-function experiments in the developing mouse inner ear

Education and training

  • Degrees

    • B.S., 1987, Boston College
    • M.S., 1991, Boston College
    • Ph.D., 1997, Boston College
  • Fellowship

    • Postdoctoral, University of Texas at Austin in Developmental Genetics 1998
    • Postdoctoral, Purdue University in Developmental Biology 2003

Areas of interest

  • Fate of otic epithelial progenitors in the mouse otic vesicle
  • Lineage relationships of sensory and nonsensory cells in the mouse inner ear
  • Molecular regulation of sensory organ formation

Publications

Selected publications

  • Brigande, J.V., Iten, L.E., and Fekete, D.M. (2000) A fate map of chick otic cup closure reveals lineage boundaries in the dorsal otocyst. Dev. Biol. 227: 256-270.
  • Gubbels, S.P., Woessner, D.W., Mitchell, J.C., Ricci, A.J., and Brigande, J.V. (2008) Functional auditory hair cells produced in the mammalian cochlea by in utero gene transfer. Nature 455: 475-77.
  • Brigande, J. V. and Heller, S. (2009) Quo Vadis, Hair Cell Regeneration? Nature Neuroscience 12: 679-685.
  • Wang, L., Jiang, H., and Brigande, J.V. (2012) Gene transfer to the developing mouse inner ear by in vivo electroporation. J Vis Exp, (64), e3653-e3653.
  • Jiang, H., Wang, L., Beier, K.T., Cepko, C.L., Fekete, D.M., and Brigande, J.V. (2013) Lineage analysis of the late otocyst stage mouse inner ear by transuterine microinjection of a retroviral vector encoding alkaline phosphatase and an oligonucleotide library. PloS One 8: e69314.

Publications

  • CRISPR/Cas9 editing of the MYO7A gene in rhesus macaque embryos to generate a primate model of Usher syndrome type 1B

    Scientific Reports
    1. Junghyun Ryu
    2. John P. Statz
    3. William Chan
    4. Fernanda C. Burch
    5. John V. Brigande
    6. Beth Kempton
    7. Edward V. Porsov
    8. Lauren Renner
    9. Trevor McGill
    10. Benjamin J. Burwitz
    11. Carol B. Hanna
    12. Martha Neuringer
    13. Jon D. Hennebold
  • A neonatal nonhuman primate model of gestational Zika virus infection with evidence of microencephaly, seizures and cardiomyopathy

    PloS one
    1. Rosemary J. Steinbach
    2. Nicole N. Haese
    3. Jessica L. Smith
    4. Lois M.A. Colgin
    5. Rhonda P. MacAllister
    6. Justin M. Greene
    7. Christopher J. Parkins
    8. J. Beth Kempton
    9. Edward Porsov
    10. Xiaojie Wang
    11. Lauren M. Renner
    12. Trevor J. McGill
    13. Brandy L. Dozier
    14. Craig N. Kreklywich
    15. Takeshi F. Andoh
    16. Marjorie R. Grafe
    17. Heidi L. Pecoraro
    18. Travis Hodge
    19. Robert M. Friedman
    20. Lisa A. Houser
    21. Terry K. Morgan
    22. Peter Stenzel
    23. Jonathan R. Lindner
    24. Robert L. Schelonka
    25. Jonah B. Sacha
    26. Victoria H.J. Roberts
    27. Martha Neuringer
    28. John V. Brigande
    29. Christopher D. Kroenke
    30. Antonio E. Frias
    31. Anne D. Lewis
    32. Meredith A. Kelleher
    33. Alec J. Hirsch
    34. Daniel Neal Streblow
  • Deleterious mtDNA mutations are common in mature oocytes

    Biology of reproduction
    1. Hong Ma
    2. Tomonari Hayama
    3. Crystal Van Dyken
    4. Hayley Darby
    5. Amy Koski
    6. Yeonmi Lee
    7. Nuria Marti Gutierrez
    8. Satsuki Yamada
    9. Ying Li
    10. Michael Andrews
    11. Riffat Ahmed
    12. Dan Liang
    13. Thanasup Gonmanee
    14. Eunju Kang
    15. Mohammed Nasser
    16. Beth Kempton
    17. John Brigande
    18. Trevor J. McGill
    19. Andre Terzic
    20. Paula Amato
    21. Shoukhrat Mitalipov
  • Fetal antisense oligonucleotide therapy for congenital deafness and vestibular dysfunction

    Nucleic acids research
    1. Lingyan Wang
    2. J. Beth Kempton
    3. Han Jiang
    4. Francine M. Jodelka
    5. Alev M. Brigande
    6. Rachel A. Dumont
    7. Frank Rigo
    8. Jennifer J. Lentz
    9. Michelle L. Hastings
    10. John V. Brigande
  • Optimizing Auditory Brainstem Response Acquisition Using Interleaved Frequencies

    JARO - Journal of the Association for Research in Otolaryngology
    1. Brad N. Buran
    2. Sean Elkins
    3. J. Beth Kempton
    4. Edward V. Porsov
    5. John V. Brigande
    6. Stephen V. David
  • TGFβ signaling is critical for maintenance of the tendon cell fate

    eLife
    1. Guak Kim Tan
    2. Brian A. Pryce
    3. Anna Stabio
    4. John V. Brigande
    5. Chaojie Wang
    6. Zheng Xia
    7. Sara F. Tufa
    8. Douglas R. Keene
    9. Ronen Schweitzer
  • Requirement for scleraxis in the recruitment of mesenchymal progenitors during embryonic tendon elongation

    Development (Cambridge)
    1. Alice H. Huang
    2. Spencer S. Watson
    3. Lingyan Wang
    4. Brendon M. Baker
    5. Haruhiko Akiyama
    6. John V. Brigande
    7. Ronen Schweitzer
  • Gene therapy in mouse models of deafness and balance dysfunction

    Frontiers in Molecular Neuroscience
    1. Lingyan Wang
    2. J. Beth Kempton
    3. John V. Brigande
  • Antisense oligonucleotides delivered to the amniotic cavity in utero modulate gene expression in the postnatal mouse

    Nucleic acids research
    1. Frederic F. Depreux
    2. Lingyan Wang
    3. Han Jiang
    4. Francine M. Jodelka
    5. Robert F. Rosencrans
    6. Frank Rigo
    7. Jennifer J. Lentz
    8. John V. Brigande
    9. Michelle L. Hastings
  • Optogenetic Control of Mouse Outer Hair Cells

    Biophysical Journal
    1. Tao Wu
    2. Sripriya Ramamoorthy
    3. Teresa Wilson
    4. Fangyi Chen
    5. Edward Porsov
    6. Hrebesh Subhash
    7. Sarah Foster
    8. Yuan Zhang
    9. Irina Omelchenko
    10. Michael Bateschell
    11. Lingyan Wang
    12. John V. Brigande
    13. Zhi Gen Jiang
    14. Tianyi Mao
    15. Alfred L. Nuttall
  • Lineage Analysis of the Late Otocyst Stage Mouse Inner Ear by Transuterine Microinjection of A Retroviral Vector Encoding Alkaline Phosphatase and an Oligonucleotide Library

    PloS one
    1. Han Jiang
    2. Lingyan Wang
    3. Kevin T. Beier
    4. Constance L. Cepko
    5. Donna M. Fekete
    6. John V. Brigande
  • Prolyl 3-hydroxylase-1 null mice exhibit hearing impairment and abnormal morphology of the middle ear bone joints

    Matrix Biology
    1. Elena Pokidysheva
    2. Sara Tufa
    3. Chris Bresee
    4. John V. Brigande
    5. Hans Peter Bächinger
  • Gene transfer to the developing mouse inner ear by in vivo electroporation

    Journal of Visualized Experiments
    1. Lingyan Wang
    2. Han Jiang
    3. John V. Brigande
  • Gipc1 has a dual role in Vangl2 trafficking and hair bundle integrity in the inner ear

    Development (Cambridge)
    1. Arnaud P. Giese
    2. Jérome Ezan
    3. Lingyan Wang
    4. Léa Lasvaux
    5. Frédérique Lembo
    6. Claire Mazzocco
    7. Elodie Richard
    8. Jérome Reboul
    9. Jean Paul Borg
    10. Matthew W. Kelley
    11. Nathalie Sans
    12. John Brigande
    13. Mireille Montcouquiol
  • Probing the functional equivalence of otoferlin and synaptotagmin 1 in exocytosis

    Journal of Neuroscience
    1. Ellen Reisinger
    2. Chris Bresee
    3. Jakob Neef
    4. Ramya Nair
    5. Kirsten Reuter
    6. Anna Bulankina
    7. Régis Nouvian
    8. Manuel Koch
    9. Johanna Bückers
    10. Lars Kastrup
    11. Isabelle Roux
    12. Christine Petit
    13. Stefan W. Hell
    14. Nils Brose
    15. Jeong Seop Rhee
    16. Sebastian Kügler
    17. John V. Brigande
    18. Tobias Moser
  • Scleraxis is required for differentiation of the stapedius and tensor tympani tendons of the middle ear.

    Journal of the Association for Research in Otolaryngology : JARO
    1. Lingyan Wang
    2. Chris S. Bresee
    3. Han Jiang
    4. Wenxuan He
    5. Tianying Ren
    6. Ronen Schweitzer
    7. John V. Brigande
  • Functional auditory hair cells produced in the mammalian cochlea by in utero gene transfer

    Nature
    1. Samuel P. Gubbels
    2. David W. Woessner
    3. John C. Mitchell
    4. Anthony J. Ricci
    5. John V. Brigande
  • In Vivo Delivery of Recombinant Viruses to the Fetal Murine Cochlea

    Molecular Therapy
    1. Jeffrey C. Bedrosian
    2. Michael Anne Gratton
    3. John V. Brigande
    4. Waixing Tang
    5. Jessica Landau
    6. Jean Bennett
  • The development of semicircular canals in the inner ear

    Development
    1. Weise Chang
    2. John V. Brigande
    3. Donna M. Fekete
    4. Doris K. Wu
  • A fate map of chick otic cup closure reveals lineage boundaries in the dorsal otocyst

    Developmental Biology
    1. John V. Brigande
    2. Laurie E. Iten
    3. Donna M. Fekete
  • Glycosphingolipid biosynthesis may not be necessary for vertebrate brain development

    Annals of the New York Academy of Sciences
    1. John V. Brigande
    2. Thomas N. Seyfried